Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947594.1_cds_XP_016489221.1_79768
CDS Infomation

[gene=LOC107809139] [db_xref=GeneID:107809139] [protein=phospholipid:diacylglycerol acyltransferase 1-like] [protein_id=XP_016489221.1] [location=join(21280..21710,23067..23289,23408..23691,24240..24567,26133..26389,27390..27873)] [gbkey=CDS]
Sequence

ATGTCGTTAATTCGAAGAAGAAAAGCACCTGAAAATGAAATTTCAACGGATGCGGAGCCA
AAGCCTGATGCAGAAGAAGACGATAAGAAAAGTAAGAAAAATATAAAGGTAGGAAACAAG
CAGAAATGGTCGTGCATCGACAGTTGCTGTTGGTTTATAGGATGTATATGCTGTGTGTGG
TGGCTTCTGCTCTTTTTATACAATGCTATGCCGGCGTCGTTCCCGCAGTACGTGACGGAG
GCAATAACGGGGCCGTTACCTGATCCACCAGGCGTTAAATTGCAGAAGGAAGGATTAAAG
GCTAAGCATCCGGTGGTTTTTATTCCAGGAATCGTCACGTGCGGTCTTGAACTATGGGAA
GGTCATCAGTGTGCTGAAGGATTGTTCCGGAAGCGGCTTTGGGGCGGTACCTTTGGAGAA
GTGTACAAAAGACCGCTGTGCTGGGTGGACCATATGACACTAGATAATGAAACTGGGATG
GATCCTCCTGGTATTAGAGTTAGGCCAGTTAGTGGACTTGTTGCTGCAGATTACTTTGCT
CCAGGATACTTTGTCTGGGCAGTTTTGATTGCTAACTTGGCCCGAATAGGATACGAGGAG
AAAACAATGTATATGGCTGCATATGATTGGAGGCTTTCATTTCAGAACACCGAGGTGCGT
GACCAGACCCTGAGCCGGATAAAAAGCAATATAGAACTGATGGTTGCAACTAATGGGGGC
AAGAAGGCAGTAATTGTTCCACATTCCATGGGGGTTGTATACTTCTTGCATTTTATGAAG
TGGGTGGAGGCACCAGCCCCAATGGGTGGTGGCGGTGGGCCCGATTGGTGCGCCAAGCAT
ATTAAAGCAGTGATGAATATTGGTGGGCCATTGTTAGGTGTTCCAAAATCTATAGCTGGG
CTTTTCTCAGCTGAAGCACGGGATATAGCTGTTGCCAGGGCTATAGCCCCAGGTGTTCTG
GATAAGGATTTATTCCATTTTCAAACATTAGAGCACATAATGAAGATGACACGAACATGG
GACTCAACCATGTCAATGATACCAAGAGGAGGGGACACGATCTGGGGCGATCTTGACTGG
TCACCCGAAGAAGGCTATTCTCCTTGCAGAAGTAAGTCTAAAGATGATGCCGCTCAGATT
TCAGGCCATGACGAGAATCGAACTACAGATTCTAATGCAAAATATTACAGTTATGGAAGG
ATGATATCCTTTGGAAAGGATGCAGCAAAGGCACATTCATCAGACCTCAAGAGGATTGAC
TTTAGGGGTGCTGTAAAGGGCAGTAATGTTGCAAATAACACCTGTGATGTGTGGAACGAG
TACCATGACATGGGTGTTAGTGGTGCTAAAGCAGTGGAAGAGTACAAGGTTTATACAGCT
GGAGAGATTTTGGATTTGCTCAACTTTGTTGCCCCAAAGATGATGGCCCGTGGTAGTGCT
CACTTTTCATATGGGATAGCTGATGATCTGGATGATCCTAAGTATTCACACTACAAATAT
TGGTCAAATCCATTGGAAACAAAGTTACCAGATGCACCTGACATGGAAATCTATTCAATG
TATGGAGTCGGCATTCAAACTGAAAGAGCATATGTTTACAGACGGATGCCAACAGCAGGA
TGCAATATTCCATTCCAGATTGATGCTTCAGTTGATGAAGAGGATGAAGATAGCTGCTTG
AAATCTGGTGTTTACACAGTAGATGGTGATGAGACTGTGCCTGCATTAAGCGCAGGATTC
ATGTATGCCAAAGGATGGCGCGGAAGAACTAGATTTAATCCCTCTGGTATCAAAACTTAT
ATAAGAGAGTATTTTCATGCTCCTCCCGCAAACCTTCTTGAGGGTCGTGGTACACAGAGT
GGAGCCCACGTTGATATAATGGGAAATTTTGCTTTGATAGAGGATGTAATGAGAGTTGCT
GCTGGTGGTACAGGTGAAGACGTGGGAGGTGATCAAGTTTTCTCAGATATCTTCAAGTGG
TCTGAGAAGATCAGTTTGCGATTGTGA

Peptide Sequence

PEP ID

XP_016489221.1
PEP Infomation

PREDICTED: phospholipid:diacylglycerol acyltransferase 1-like [Nicotiana tabacum]
Sequence

MSLIRRRKAPENEISTDAEPKPDAEEDDKKSKKNIKVGNKQKWSCIDSCCWFIGCICCVW
WLLLFLYNAMPASFPQYVTEAITGPLPDPPGVKLQKEGLKAKHPVVFIPGIVTCGLELWE
GHQCAEGLFRKRLWGGTFGEVYKRPLCWVDHMTLDNETGMDPPGIRVRPVSGLVAADYFA
PGYFVWAVLIANLARIGYEEKTMYMAAYDWRLSFQNTEVRDQTLSRIKSNIELMVATNGG
KKAVIVPHSMGVVYFLHFMKWVEAPAPMGGGGGPDWCAKHIKAVMNIGGPLLGVPKSIAG
LFSAEARDIAVARAIAPGVLDKDLFHFQTLEHIMKMTRTWDSTMSMIPRGGDTIWGDLDW
SPEEGYSPCRSKSKDDAAQISGHDENRTTDSNAKYYSYGRMISFGKDAAKAHSSDLKRID
FRGAVKGSNVANNTCDVWNEYHDMGVSGAKAVEEYKVYTAGEILDLLNFVAPKMMARGSA
HFSYGIADDLDDPKYSHYKYWSNPLETKLPDAPDMEIYSMYGVGIQTERAYVYRRMPTAG
CNIPFQIDASVDEEDEDSCLKSGVYTVDGDETVPALSAGFMYAKGWRGRTRFNPSGIKTY
IREYFHAPPANLLEGRGTQSGAHVDIMGNFALIEDVMRVAAGGTGEDVGGDQVFSDIFKW
SEKISLRL

Transcript Sequence

Gene sequence data has not been registered.